Protein–RNA interactions for Protein: Q9CQ82

Itgb3bp, Centromere protein R, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3bpQ9CQ82 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Itgb3bpQ9CQ82 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3bpQ9CQ82 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3bpQ9CQ82 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3bpQ9CQ82 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3bpQ9CQ82 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3bpQ9CQ82 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3bpQ9CQ82 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Itgb3bpQ9CQ82 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3bpQ9CQ82 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3bpQ9CQ82 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3bpQ9CQ82 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Itgb3bpQ9CQ82 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3bpQ9CQ82 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Gm15483-201ENSMUST00000120338 456 ntBASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Gm25925-201ENSMUST00000158314 306 ntBASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Rpph1-201ENSMUST00000175096 319 ntBASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3bpQ9CQ82 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Mir3113-201ENSMUST00000175478 76 ntBASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3bpQ9CQ82 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.77□□□□□ -0.36
Itgb3bpQ9CQ82 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Itgb3bpQ9CQ82 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Itgb3bpQ9CQ82 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Itgb3bpQ9CQ82 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Itgb3bpQ9CQ82 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Itgb3bpQ9CQ82 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Itgb3bpQ9CQ82 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.77□□□□□ -0.36
Itgb3bpQ9CQ82 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.77□□□□□ -0.36
Itgb3bpQ9CQ82 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Itgb3bpQ9CQ82 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Itgb3bpQ9CQ82 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Itgb3bpQ9CQ82 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms