Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb13Q91Y06 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb13Q91Y06 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb13Q91Y06 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb13Q91Y06 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Gm3436-201ENSMUST00000179930 840 ntBASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Gm43930-201ENSMUST00000203868 845 ntBASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Gm44719-201ENSMUST00000206404 149 ntBASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb13Q91Y06 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdhb13Q91Y06 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdhb13Q91Y06 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Gm12585-201ENSMUST00000117307 290 ntBASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Gm13223-201ENSMUST00000118609 747 ntBASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Gm13453-201ENSMUST00000118708 357 ntBASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Gm4804-201ENSMUST00000182234 999 ntBASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb13Q91Y06 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb13Q91Y06 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb13Q91Y06 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb13Q91Y06 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb13Q91Y06 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb13Q91Y06 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms