Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H1fooQ8VIK3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
H1fooQ8VIK3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H1fooQ8VIK3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H1fooQ8VIK3 Matn2-206ENSMUST00000228570 2798 ntBASIC11.56□□□□□ -0.56
H1fooQ8VIK3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Gm27430-201ENSMUST00000184585 107 ntBASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Gm44333-201ENSMUST00000197168 107 ntBASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H1fooQ8VIK3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Gm15653-201ENSMUST00000119247 907 ntBASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Gm12428-201ENSMUST00000119844 727 ntBASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Gm25948-201ENSMUST00000175334 112 ntBASIC11.54□□□□□ -0.56
H1fooQ8VIK3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Shd-206ENSMUST00000225145 998 ntBASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H1fooQ8VIK3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms