Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.5■□□□□ 0.07
Syne4Q8CII8 Gm16379-201ENSMUST00000161469 348 ntBASIC15.5■□□□□ 0.07
Syne4Q8CII8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.5■□□□□ 0.07
Syne4Q8CII8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.5■□□□□ 0.07
Syne4Q8CII8 Gm8762-201ENSMUST00000193486 339 ntBASIC15.5■□□□□ 0.07
Syne4Q8CII8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.5■□□□□ 0.07
Syne4Q8CII8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.5■□□□□ 0.07
Syne4Q8CII8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.5■□□□□ 0.07
Syne4Q8CII8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syne4Q8CII8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.49■□□□□ 0.07
Syne4Q8CII8 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.49■□□□□ 0.07
Syne4Q8CII8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.49■□□□□ 0.07
Syne4Q8CII8 Gm37259-201ENSMUST00000193903 849 ntBASIC15.49■□□□□ 0.07
Syne4Q8CII8 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.49■□□□□ 0.07
Syne4Q8CII8 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.49■□□□□ 0.07
Syne4Q8CII8 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.49■□□□□ 0.07
Syne4Q8CII8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.49■□□□□ 0.07
Syne4Q8CII8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Syne4Q8CII8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Gm15370-201ENSMUST00000117158 253 ntBASIC15.48■□□□□ 0.07
Syne4Q8CII8 Gm13786-201ENSMUST00000122371 333 ntBASIC15.48■□□□□ 0.07
Syne4Q8CII8 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Gm27320-201ENSMUST00000184892 109 ntBASIC15.48■□□□□ 0.07
Syne4Q8CII8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Mir433-201ENSMUST00000093564 124 ntBASIC15.48■□□□□ 0.07
Syne4Q8CII8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.48■□□□□ 0.07
Syne4Q8CII8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syne4Q8CII8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.48■□□□□ 0.07
Syne4Q8CII8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms