Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf3Q8C120 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Gm3436-201ENSMUST00000179930 840 ntBASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf3Q8C120 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Gm15393-201ENSMUST00000120499 219 ntBASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Gm27306-201ENSMUST00000183970 107 ntBASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Gm27989-201ENSMUST00000184721 107 ntBASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.35□□□□□ -0.11
Sh3rf3Q8C120 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms