Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdhr3Q8BL00 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdhr3Q8BL00 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdhr3Q8BL00 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdhr3Q8BL00 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdhr3Q8BL00 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cdhr3Q8BL00 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdhr3Q8BL00 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdhr3Q8BL00 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Cdhr3Q8BL00 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdhr3Q8BL00 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdhr3Q8BL00 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdhr3Q8BL00 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.04□□□□□ -0.48
Cdhr3Q8BL00 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdhr3Q8BL00 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdhr3Q8BL00 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Gm15467-201ENSMUST00000120582 445 ntBASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Gm6443-201ENSMUST00000203599 874 ntBASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Gm44719-201ENSMUST00000206404 149 ntBASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Gm18206-201ENSMUST00000207027 926 ntBASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdhr3Q8BL00 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdhr3Q8BL00 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.02□□□□□ -0.48
Cdhr3Q8BL00 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdhr3Q8BL00 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdhr3Q8BL00 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdhr3Q8BL00 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdhr3Q8BL00 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.02□□□□□ -0.48
Cdhr3Q8BL00 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdhr3Q8BL00 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms