Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm7977-201ENSMUST00000193787 748 ntBASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm13730-201ENSMUST00000121036 1462 ntBASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm6756-201ENSMUST00000180647 1620 ntBASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm3809-201ENSMUST00000180973 1006 ntBASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ank2-226ENSMUST00000189368 339 ntBASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 AC161829.1-201ENSMUST00000220298 281 ntBASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms