Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-3Q5R1C3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Gm8097-201ENSMUST00000117903 829 ntBASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Gm12644-201ENSMUST00000119935 606 ntBASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Gm7284-201ENSMUST00000131667 944 ntBASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Gm7506-201ENSMUST00000207758 815 ntBASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav3-3Q5R1C3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 AC154757.1-201ENSMUST00000228289 336 ntBASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms