Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Gm15376-201ENSMUST00000122258 783 ntBASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nhlrc4Q3UP44 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nhlrc4Q3UP44 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nhlrc4Q3UP44 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Gm7488-201ENSMUST00000117148 684 ntBASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Gm27772-201ENSMUST00000184900 187 ntBASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nhlrc4Q3UP44 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms