Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.3□□□□□ -0.44
SgcbP82349 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SgcbP82349 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcbP82349 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcbP82349 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcbP82349 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SgcbP82349 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcbP82349 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcbP82349 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SgcbP82349 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcbP82349 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SgcbP82349 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcbP82349 Mir698-201ENSMUST00000102164 109 ntBASIC12.29□□□□□ -0.44
SgcbP82349 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SgcbP82349 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcbP82349 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SgcbP82349 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.29□□□□□ -0.44
SgcbP82349 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SgcbP82349 Gm24420-201ENSMUST00000176676 59 ntBASIC12.29□□□□□ -0.44
SgcbP82349 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcbP82349 Gm18905-201ENSMUST00000205454 928 ntBASIC12.29□□□□□ -0.44
SgcbP82349 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SgcbP82349 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.29□□□□□ -0.44
SgcbP82349 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SgcbP82349 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcbP82349 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcbP82349 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcbP82349 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.29□□□□□ -0.44
SgcbP82349 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcbP82349 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SgcbP82349 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcbP82349 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.29□□□□□ -0.44
SgcbP82349 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.29□□□□□ -0.44
SgcbP82349 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcbP82349 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SgcbP82349 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.29□□□□□ -0.44
SgcbP82349 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SgcbP82349 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SgcbP82349 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.28□□□□□ -0.44
SgcbP82349 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SgcbP82349 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SgcbP82349 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SgcbP82349 Gm12859-201ENSMUST00000117834 427 ntBASIC12.28□□□□□ -0.44
SgcbP82349 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.28□□□□□ -0.44
SgcbP82349 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SgcbP82349 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SgcbP82349 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.28□□□□□ -0.44
SgcbP82349 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.28□□□□□ -0.44
SgcbP82349 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.28□□□□□ -0.44
SgcbP82349 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SgcbP82349 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Mir497b-201ENSMUST00000093601 125 ntBASIC12.28□□□□□ -0.44
SgcbP82349 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.28□□□□□ -0.44
SgcbP82349 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.28□□□□□ -0.44
SgcbP82349 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcbP82349 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SgcbP82349 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SgcbP82349 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SgcbP82349 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SgcbP82349 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SgcbP82349 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SgcbP82349 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SgcbP82349 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SgcbP82349 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
SgcbP82349 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SgcbP82349 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SgcbP82349 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.27□□□□□ -0.44
SgcbP82349 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SgcbP82349 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.27□□□□□ -0.45
SgcbP82349 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms