Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33bP59016 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC17.16■□□□□ 0.34
Vps33bP59016 Gm8176-201ENSMUST00000191297 1099 ntBASIC17.16■□□□□ 0.34
Vps33bP59016 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33bP59016 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Vps33bP59016 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33bP59016 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Vps33bP59016 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33bP59016 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33bP59016 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Vps33bP59016 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33bP59016 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33bP59016 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Vps33bP59016 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Vps33bP59016 Gm12217-201ENSMUST00000118858 696 ntBASIC17.15■□□□□ 0.34
Vps33bP59016 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
Vps33bP59016 Gm22334-201ENSMUST00000158070 133 ntBASIC17.15■□□□□ 0.34
Vps33bP59016 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Vps33bP59016 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC17.15■□□□□ 0.34
Vps33bP59016 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC17.15■□□□□ 0.34
Vps33bP59016 AA914427-201ENSMUST00000193194 1166 ntBASIC17.15■□□□□ 0.34
Vps33bP59016 Gm9678-201ENSMUST00000198979 1149 ntBASIC17.15■□□□□ 0.34
Vps33bP59016 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Vps33bP59016 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Vps33bP59016 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Gm8862-201ENSMUST00000198379 1346 ntBASIC17.15■□□□□ 0.34
Vps33bP59016 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC17.15■□□□□ 0.34
Vps33bP59016 AC123857.2-201ENSMUST00000225756 1582 ntBASIC17.15■□□□□ 0.34
Vps33bP59016 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33bP59016 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Vps33bP59016 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps33bP59016 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps33bP59016 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps33bP59016 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps33bP59016 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps33bP59016 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vps33bP59016 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps33bP59016 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
Vps33bP59016 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Vps33bP59016 Gm11930-201ENSMUST00000117788 190 ntBASIC17.14■□□□□ 0.33
Vps33bP59016 Gm12201-201ENSMUST00000120657 1234 ntBASIC17.14■□□□□ 0.33
Vps33bP59016 Gm13665-201ENSMUST00000120830 528 ntBASIC17.14■□□□□ 0.33
Vps33bP59016 Gm14277-201ENSMUST00000121195 360 ntBASIC17.14■□□□□ 0.33
Vps33bP59016 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC17.14■□□□□ 0.33
Vps33bP59016 AC069562.3-201ENSMUST00000225387 587 ntBASIC17.14■□□□□ 0.33
Vps33bP59016 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps33bP59016 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vps33bP59016 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Vps33bP59016 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.14■□□□□ 0.33
Vps33bP59016 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vps33bP59016 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps33bP59016 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Vps33bP59016 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.14■□□□□ 0.33
Vps33bP59016 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vps33bP59016 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps33bP59016 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Vps33bP59016 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.13■□□□□ 0.33
Vps33bP59016 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Gm23270-201ENSMUST00000104055 131 ntBASIC17.13■□□□□ 0.33
Vps33bP59016 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Vps33bP59016 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Vps33bP59016 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC17.13■□□□□ 0.33
Vps33bP59016 Gm19963-201ENSMUST00000208413 1255 ntBASIC17.13■□□□□ 0.33
Vps33bP59016 Gm32025-201ENSMUST00000217960 307 ntBASIC17.13■□□□□ 0.33
Vps33bP59016 Gm9004-201ENSMUST00000218739 1222 ntBASIC17.13■□□□□ 0.33
Vps33bP59016 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.13■□□□□ 0.33
Vps33bP59016 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms