Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ctdsp1P58466 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ctdsp1P58466 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC10.72□□□□□ -0.69
Ctdsp1P58466 AC134329.2-201ENSMUST00000217897 428 ntBASIC10.72□□□□□ -0.69
Ctdsp1P58466 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.72□□□□□ -0.69
Ctdsp1P58466 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Tcf21-202ENSMUST00000218002 1788 ntBASIC10.72□□□□□ -0.69
Ctdsp1P58466 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Ctdsp1P58466 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Gm25745-201ENSMUST00000174945 133 ntBASIC10.71□□□□□ -0.69
Ctdsp1P58466 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Gm44719-201ENSMUST00000206404 149 ntBASIC10.71□□□□□ -0.69
Ctdsp1P58466 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.71□□□□□ -0.69
Ctdsp1P58466 AC164629.5-201ENSMUST00000220387 632 ntBASIC10.71□□□□□ -0.69
Ctdsp1P58466 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Ctdsp1P58466 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ctdsp1P58466 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ctdsp1P58466 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.71□□□□□ -0.7
Ctdsp1P58466 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ctdsp1P58466 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ctdsp1P58466 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ctdsp1P58466 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ctdsp1P58466 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ctdsp1P58466 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.71□□□□□ -0.7
Ctdsp1P58466 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
Ctdsp1P58466 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ctdsp1P58466 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ctdsp1P58466 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ctdsp1P58466 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ctdsp1P58466 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ctdsp1P58466 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms