Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.09□□□□□ -0.47
GdnfP48540 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.09□□□□□ -0.47
GdnfP48540 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.09□□□□□ -0.47
GdnfP48540 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
GdnfP48540 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Gm5479-201ENSMUST00000160578 435 ntBASIC12.09□□□□□ -0.47
GdnfP48540 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Gm27494-201ENSMUST00000184735 189 ntBASIC12.09□□□□□ -0.47
GdnfP48540 Gm2213-201ENSMUST00000197485 688 ntBASIC12.09□□□□□ -0.47
GdnfP48540 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.09□□□□□ -0.47
GdnfP48540 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
GdnfP48540 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
GdnfP48540 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.09□□□□□ -0.47
GdnfP48540 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GdnfP48540 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
GdnfP48540 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
GdnfP48540 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
GdnfP48540 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
GdnfP48540 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
GdnfP48540 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
GdnfP48540 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.08□□□□□ -0.48
GdnfP48540 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.08□□□□□ -0.48
GdnfP48540 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.08□□□□□ -0.48
GdnfP48540 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.08□□□□□ -0.48
GdnfP48540 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.08□□□□□ -0.48
GdnfP48540 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
GdnfP48540 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.08□□□□□ -0.48
GdnfP48540 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Gm27702-201ENSMUST00000184512 56 ntBASIC12.08□□□□□ -0.48
GdnfP48540 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
GdnfP48540 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.08□□□□□ -0.48
GdnfP48540 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
GdnfP48540 Gm18057-201ENSMUST00000208220 503 ntBASIC12.08□□□□□ -0.48
GdnfP48540 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.08□□□□□ -0.48
GdnfP48540 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.08□□□□□ -0.48
GdnfP48540 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.08□□□□□ -0.48
GdnfP48540 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.08□□□□□ -0.48
GdnfP48540 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
GdnfP48540 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.08□□□□□ -0.48
GdnfP48540 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
GdnfP48540 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
GdnfP48540 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
GdnfP48540 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.07□□□□□ -0.48
GdnfP48540 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms