Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf9P41274 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf9P41274 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf9P41274 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf9P41274 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf9P41274 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf9P41274 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf9P41274 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Tnfsf9P41274 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf9P41274 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf9P41274 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf9P41274 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Gm9002-201ENSMUST00000178437 499 ntBASIC13.18□□□□□ -0.3
Tnfsf9P41274 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tnfsf9P41274 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.18□□□□□ -0.3
Tnfsf9P41274 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf9P41274 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.17□□□□□ -0.3
Tnfsf9P41274 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Gm12485-201ENSMUST00000119641 291 ntBASIC13.17□□□□□ -0.3
Tnfsf9P41274 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.17□□□□□ -0.3
Tnfsf9P41274 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.17□□□□□ -0.3
Tnfsf9P41274 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.17□□□□□ -0.3
Tnfsf9P41274 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.17□□□□□ -0.3
Tnfsf9P41274 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf9P41274 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf9P41274 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf9P41274 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.16□□□□□ -0.3
Tnfsf9P41274 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf9P41274 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Tnfsf9P41274 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Tnfsf9P41274 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.16□□□□□ -0.3
Tnfsf9P41274 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf9P41274 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf9P41274 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf9P41274 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf9P41274 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Tnfsf9P41274 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms