Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.09□□□□□ -0.47
Upk2P38575 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Gm4875-201ENSMUST00000118257 786 ntBASIC12.09□□□□□ -0.47
Upk2P38575 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.09□□□□□ -0.47
Upk2P38575 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.09□□□□□ -0.47
Upk2P38575 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Mir6956-201ENSMUST00000183598 62 ntBASIC12.09□□□□□ -0.47
Upk2P38575 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.09□□□□□ -0.47
Upk2P38575 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.09□□□□□ -0.47
Upk2P38575 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Upk2P38575 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Upk2P38575 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.09□□□□□ -0.47
Upk2P38575 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Upk2P38575 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.09□□□□□ -0.47
Upk2P38575 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Upk2P38575 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.09□□□□□ -0.47
Upk2P38575 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Upk2P38575 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Matn2-206ENSMUST00000228570 2798 ntBASIC12.08□□□□□ -0.48
Upk2P38575 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Upk2P38575 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Upk2P38575 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.08□□□□□ -0.48
Upk2P38575 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.08□□□□□ -0.48
Upk2P38575 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.08□□□□□ -0.48
Upk2P38575 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.08□□□□□ -0.48
Upk2P38575 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Upk2P38575 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.08□□□□□ -0.48
Upk2P38575 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Upk2P38575 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.08□□□□□ -0.48
Upk2P38575 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk2P38575 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk2P38575 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk2P38575 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk2P38575 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk2P38575 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk2P38575 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk2P38575 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk2P38575 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk2P38575 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk2P38575 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk2P38575 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.07□□□□□ -0.48
Upk2P38575 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.07□□□□□ -0.48
Upk2P38575 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Upk2P38575 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Upk2P38575 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk2P38575 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk2P38575 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk2P38575 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk2P38575 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Upk2P38575 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.07□□□□□ -0.48
Upk2P38575 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.07□□□□□ -0.48
Upk2P38575 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Upk2P38575 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms