Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmga1P17095 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Hmga1P17095 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmga1P17095 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmga1P17095 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmga1P17095 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmga1P17095 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.02□□□□□ -0.17
Hmga1P17095 Gm13226-201ENSMUST00000117838 404 ntBASIC14.02□□□□□ -0.17
Hmga1P17095 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.02□□□□□ -0.17
Hmga1P17095 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.02□□□□□ -0.17
Hmga1P17095 Proscos-202ENSMUST00000178990 666 ntBASIC14.02□□□□□ -0.17
Hmga1P17095 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.02□□□□□ -0.17
Hmga1P17095 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga1P17095 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga1P17095 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hmga1P17095 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga1P17095 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga1P17095 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga1P17095 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Hmga1P17095 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga1P17095 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga1P17095 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hmga1P17095 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga1P17095 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga1P17095 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga1P17095 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga1P17095 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga1P17095 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Hmga1P17095 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Hmga1P17095 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.01□□□□□ -0.17
Hmga1P17095 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
Hmga1P17095 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.01□□□□□ -0.17
Hmga1P17095 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hmga1P17095 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.01□□□□□ -0.17
Hmga1P17095 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Hmga1P17095 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.01□□□□□ -0.17
Hmga1P17095 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.01□□□□□ -0.17
Hmga1P17095 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.01□□□□□ -0.17
Hmga1P17095 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.01□□□□□ -0.17
Hmga1P17095 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.01□□□□□ -0.17
Hmga1P17095 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.01□□□□□ -0.17
Hmga1P17095 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.01□□□□□ -0.17
Hmga1P17095 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.01□□□□□ -0.17
Hmga1P17095 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.01□□□□□ -0.17
Hmga1P17095 Itm2b-204ENSMUST00000228637 783 ntBASIC14.01□□□□□ -0.17
Hmga1P17095 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hmga1P17095 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.01□□□□□ -0.17
Hmga1P17095 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.01□□□□□ -0.17
Hmga1P17095 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Hmga1P17095 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.01□□□□□ -0.17
Hmga1P17095 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.01□□□□□ -0.17
Hmga1P17095 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga1P17095 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hmga1P17095 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmga1P17095 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmga1P17095 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmga1P17095 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmga1P17095 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmga1P17095 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Hmga1P17095 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmga1P17095 Gm10156-201ENSMUST00000122364 462 ntBASIC14□□□□□ -0.17
Hmga1P17095 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14□□□□□ -0.17
Hmga1P17095 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14□□□□□ -0.17
Hmga1P17095 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmga1P17095 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmga1P17095 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmga1P17095 Gm29649-201ENSMUST00000185649 419 ntBASIC14□□□□□ -0.17
Hmga1P17095 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmga1P17095 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14□□□□□ -0.17
Hmga1P17095 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14□□□□□ -0.17
Hmga1P17095 AC153962.4-201ENSMUST00000217878 242 ntBASIC14□□□□□ -0.17
Hmga1P17095 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14□□□□□ -0.17
Hmga1P17095 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14□□□□□ -0.17
Hmga1P17095 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmga1P17095 Gm3695-201ENSMUST00000087222 1009 ntBASIC14□□□□□ -0.17
Hmga1P17095 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmga1P17095 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms