Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UbbP0CG49 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UbbP0CG49 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UbbP0CG49 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UbbP0CG49 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
UbbP0CG49 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.99□□□□□ -0.49
UbbP0CG49 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UbbP0CG49 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UbbP0CG49 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
UbbP0CG49 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
UbbP0CG49 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UbbP0CG49 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.99□□□□□ -0.49
UbbP0CG49 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
UbbP0CG49 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
UbbP0CG49 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.98□□□□□ -0.49
UbbP0CG49 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
UbbP0CG49 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
UbbP0CG49 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
UbbP0CG49 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
UbbP0CG49 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.98□□□□□ -0.49
UbbP0CG49 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.98□□□□□ -0.49
UbbP0CG49 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.98□□□□□ -0.49
UbbP0CG49 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Gm9727-201ENSMUST00000161387 555 ntBASIC11.98□□□□□ -0.49
UbbP0CG49 AA543401-201ENSMUST00000164248 1269 ntBASIC11.98□□□□□ -0.49
UbbP0CG49 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
UbbP0CG49 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
UbbP0CG49 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
UbbP0CG49 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.98□□□□□ -0.49
UbbP0CG49 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.98□□□□□ -0.49
UbbP0CG49 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.98□□□□□ -0.49
UbbP0CG49 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.98□□□□□ -0.49
UbbP0CG49 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
UbbP0CG49 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.98□□□□□ -0.49
UbbP0CG49 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
UbbP0CG49 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.98□□□□□ -0.49
UbbP0CG49 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
UbbP0CG49 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UbbP0CG49 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
UbbP0CG49 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
UbbP0CG49 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.97□□□□□ -0.49
UbbP0CG49 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.97□□□□□ -0.49
UbbP0CG49 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.97□□□□□ -0.49
UbbP0CG49 Gm10819-201ENSMUST00000099988 561 ntBASIC11.97□□□□□ -0.49
UbbP0CG49 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
UbbP0CG49 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
UbbP0CG49 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.97□□□□□ -0.49
UbbP0CG49 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UbbP0CG49 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms