Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.16□□□□□ -0.14
Trove2O08848 Rpph1-201ENSMUST00000175096 319 ntBASIC14.16□□□□□ -0.14
Trove2O08848 Gm5264-201ENSMUST00000190584 848 ntBASIC14.16□□□□□ -0.14
Trove2O08848 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Olfr286-202ENSMUST00000205305 969 ntBASIC14.16□□□□□ -0.14
Trove2O08848 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.16□□□□□ -0.14
Trove2O08848 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.16□□□□□ -0.14
Trove2O08848 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trove2O08848 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trove2O08848 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.15□□□□□ -0.14
Trove2O08848 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trove2O08848 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
Trove2O08848 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trove2O08848 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trove2O08848 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Gm27525-201ENSMUST00000184465 107 ntBASIC14.15□□□□□ -0.14
Trove2O08848 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trove2O08848 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.15□□□□□ -0.14
Trove2O08848 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trove2O08848 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Paupar-201ENSMUST00000194826 3482 ntBASIC14.15□□□□□ -0.14
Trove2O08848 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.15□□□□□ -0.14
Trove2O08848 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trove2O08848 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trove2O08848 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trove2O08848 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.14□□□□□ -0.15
Trove2O08848 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trove2O08848 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trove2O08848 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trove2O08848 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
Trove2O08848 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trove2O08848 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.14□□□□□ -0.15
Trove2O08848 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.14□□□□□ -0.15
Trove2O08848 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.14□□□□□ -0.15
Trove2O08848 Gm45098-201ENSMUST00000207179 657 ntBASIC14.14□□□□□ -0.15
Trove2O08848 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.14□□□□□ -0.15
Trove2O08848 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trove2O08848 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Trove2O08848 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.14□□□□□ -0.15
Trove2O08848 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trove2O08848 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.14□□□□□ -0.15
Trove2O08848 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trove2O08848 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trove2O08848 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trove2O08848 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trove2O08848 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trove2O08848 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trove2O08848 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms