Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.41□□□□□ -0.42
Pcdh1F7BJK1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Gm11779-201ENSMUST00000118541 368 ntBASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Gm13823-201ENSMUST00000119930 345 ntBASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Gm29741-201ENSMUST00000192667 421 ntBASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 AW822252-206ENSMUST00000208904 237 ntBASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh1F7BJK1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.4□□□□□ -0.43
Pcdh1F7BJK1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdh1F7BJK1 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.4□□□□□ -0.43
Pcdh1F7BJK1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdh1F7BJK1 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdh1F7BJK1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdh1F7BJK1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdh1F7BJK1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 AA543401-201ENSMUST00000164248 1269 ntBASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Gm5264-201ENSMUST00000190584 848 ntBASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms