Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Gm45453-201ENSMUST00000211758 853 ntBASIC12.43□□□□□ -0.42
H2afb3S4R1G7 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.43□□□□□ -0.42
H2afb3S4R1G7 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Gm25287-201ENSMUST00000103846 110 ntBASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Gm22918-201ENSMUST00000103855 110 ntBASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb3S4R1G7 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Gm13365-201ENSMUST00000121188 973 ntBASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Gm27631-201ENSMUST00000184163 466 ntBASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 AW822252-206ENSMUST00000208904 237 ntBASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms