Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1bQ9Z2C6 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1bQ9Z2C6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1bQ9Z2C6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1bQ9Z2C6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Upk1bQ9Z2C6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1bQ9Z2C6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Upk1bQ9Z2C6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1bQ9Z2C6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1bQ9Z2C6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1bQ9Z2C6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Upk1bQ9Z2C6 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1bQ9Z2C6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Gm29741-201ENSMUST00000192667 421 ntBASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.78□□□□□ -0.36
Upk1bQ9Z2C6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Upk1bQ9Z2C6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
Upk1bQ9Z2C6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk1bQ9Z2C6 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk1bQ9Z2C6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk1bQ9Z2C6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Upk1bQ9Z2C6 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk1bQ9Z2C6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk1bQ9Z2C6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk1bQ9Z2C6 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk1bQ9Z2C6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk1bQ9Z2C6 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Upk1bQ9Z2C6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Upk1bQ9Z2C6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Upk1bQ9Z2C6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Upk1bQ9Z2C6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk1bQ9Z2C6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Upk1bQ9Z2C6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms