Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpne8Q9DC53 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpne8Q9DC53 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Cpne8Q9DC53 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpne8Q9DC53 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cpne8Q9DC53 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpne8Q9DC53 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpne8Q9DC53 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.4□□□□□ -0.1
Cpne8Q9DC53 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpne8Q9DC53 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpne8Q9DC53 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Gm21470-201ENSMUST00000187680 696 ntBASIC14.39□□□□□ -0.11
Cpne8Q9DC53 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.39□□□□□ -0.11
Cpne8Q9DC53 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.39□□□□□ -0.11
Cpne8Q9DC53 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cpne8Q9DC53 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Gm13616-201ENSMUST00000120600 222 ntBASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Gm9229-201ENSMUST00000222777 126 ntBASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne8Q9DC53 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Gm8927-201ENSMUST00000181978 981 ntBASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Gm3222-201ENSMUST00000071282 990 ntBASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms