Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.48□□□□□ -0.25
Rrp8Q9DB85 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp8Q9DB85 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp8Q9DB85 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp8Q9DB85 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp8Q9DB85 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rrp8Q9DB85 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp8Q9DB85 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp8Q9DB85 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rrp8Q9DB85 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Rrp8Q9DB85 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp8Q9DB85 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp8Q9DB85 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp8Q9DB85 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Rrp8Q9DB85 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Gm5187-201ENSMUST00000117317 991 ntBASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Gm11803-201ENSMUST00000119966 444 ntBASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Gm7399-201ENSMUST00000032395 858 ntBASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp8Q9DB85 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Gm6013-201ENSMUST00000212264 699 ntBASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp8Q9DB85 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.26
Rrp8Q9DB85 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms