Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3a3Q9D554 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3a3Q9D554 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3a3Q9D554 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.96□□□□□ -0.17
Sf3a3Q9D554 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sf3a3Q9D554 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sf3a3Q9D554 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3a3Q9D554 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.96□□□□□ -0.17
Sf3a3Q9D554 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3a3Q9D554 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.96□□□□□ -0.17
Sf3a3Q9D554 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3a3Q9D554 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3a3Q9D554 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3a3Q9D554 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3a3Q9D554 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3a3Q9D554 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sf3a3Q9D554 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.96□□□□□ -0.17
Sf3a3Q9D554 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sf3a3Q9D554 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.96□□□□□ -0.18
Sf3a3Q9D554 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sf3a3Q9D554 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sf3a3Q9D554 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Sf3a3Q9D554 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Paupar-201ENSMUST00000194826 3482 ntBASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3a3Q9D554 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Gm18041-201ENSMUST00000218210 618 ntBASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms