Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Mir698-201ENSMUST00000102164 109 ntBASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Gm45453-201ENSMUST00000211758 853 ntBASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ssu72Q9CY97 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ssu72Q9CY97 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ssu72Q9CY97 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ssu72Q9CY97 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.71□□□□□ -0.22
Ssu72Q9CY97 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ssu72Q9CY97 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ssu72Q9CY97 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ssu72Q9CY97 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ssu72Q9CY97 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.7□□□□□ -0.22
Ssu72Q9CY97 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssu72Q9CY97 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.69□□□□□ -0.22
Ssu72Q9CY97 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms