Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 AC055717.3-201ENST00000622967 595 ntBASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 AL645728.2-201ENST00000641974 660 ntBASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 MKNK2P1-201ENST00000437526 628 ntBASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 AL031432.2-201ENST00000566714 459 ntBASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 AL928711.1-201ENST00000570165 459 ntBASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 MIR4469-201ENST00000583919 79 ntBASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 AC134684.3-201ENST00000641758 218 ntBASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM48Q8IWZ4 AL023806.1-201ENST00000603994 1649 ntBASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 CEND1P1-201ENST00000451006 455 ntBASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 AC091812.2-201ENST00000619081 385 ntBASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 REXO1L3P-201ENST00000622202 1288 ntBASIC16.48■□□□□ 0.23
TRIM48Q8IWZ4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms