Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Gm27920-201ENSMUST00000183953 96 ntBASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Gm7461-201ENSMUST00000058918 827 ntBASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Gm9103-201ENSMUST00000119371 405 ntBASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Mir5126-201ENSMUST00000175513 77 ntBASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Gm2445-201ENSMUST00000182798 989 ntBASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc28bQ8CEG5 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28bQ8CEG5 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms