Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Gm13333-201ENSMUST00000119424 781 ntBASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 AC125539.1-202ENSMUST00000226449 670 ntBASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Lsm11Q8BUV6 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Gm6973-201ENSMUST00000117080 721 ntBASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Gm42919-201ENSMUST00000197753 1284 ntBASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 AC125539.1-201ENSMUST00000227423 622 ntBASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm11Q8BUV6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm11Q8BUV6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm11Q8BUV6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm11Q8BUV6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm11Q8BUV6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm11Q8BUV6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm11Q8BUV6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm11Q8BUV6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm11Q8BUV6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm11Q8BUV6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Lsm11Q8BUV6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Lsm11Q8BUV6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms