Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm12742-201ENSMUST00000117326 410 ntBASIC13.18□□□□□ -0.3
Vrk1Q80X41 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.18□□□□□ -0.3
Vrk1Q80X41 Gm15376-201ENSMUST00000122258 783 ntBASIC13.18□□□□□ -0.3
Vrk1Q80X41 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.18□□□□□ -0.3
Vrk1Q80X41 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Vrk1Q80X41 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Gm27772-201ENSMUST00000184900 187 ntBASIC13.17□□□□□ -0.3
Vrk1Q80X41 Gm7287-201ENSMUST00000205267 602 ntBASIC13.17□□□□□ -0.3
Vrk1Q80X41 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.17□□□□□ -0.3
Vrk1Q80X41 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.17□□□□□ -0.3
Vrk1Q80X41 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vrk1Q80X41 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.16□□□□□ -0.3
Vrk1Q80X41 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.16□□□□□ -0.3
Vrk1Q80X41 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Gm11814-201ENSMUST00000119515 929 ntBASIC13.16□□□□□ -0.3
Vrk1Q80X41 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Gm26464-201ENSMUST00000157094 305 ntBASIC13.16□□□□□ -0.3
Vrk1Q80X41 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.16□□□□□ -0.3
Vrk1Q80X41 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Gm45841-201ENSMUST00000207700 164 ntBASIC13.16□□□□□ -0.3
Vrk1Q80X41 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.16□□□□□ -0.3
Vrk1Q80X41 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms