Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.28□□□□□ -0.12
Trim62Q80V85 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.28□□□□□ -0.12
Trim62Q80V85 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim62Q80V85 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim62Q80V85 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim62Q80V85 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim62Q80V85 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim62Q80V85 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim62Q80V85 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim62Q80V85 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim62Q80V85 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim62Q80V85 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Trim62Q80V85 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim62Q80V85 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim62Q80V85 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim62Q80V85 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim62Q80V85 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim62Q80V85 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim62Q80V85 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim62Q80V85 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim62Q80V85 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim62Q80V85 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim62Q80V85 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim62Q80V85 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim62Q80V85 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.27□□□□□ -0.12
Trim62Q80V85 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim62Q80V85 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trim62Q80V85 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim62Q80V85 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim62Q80V85 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim62Q80V85 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trim62Q80V85 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Trim62Q80V85 Gm37917-201ENSMUST00000194711 392 ntBASIC14.27□□□□□ -0.13
Trim62Q80V85 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim62Q80V85 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim62Q80V85 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim62Q80V85 Gm15823-201ENSMUST00000064305 670 ntBASIC14.27□□□□□ -0.13
Trim62Q80V85 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim62Q80V85 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim62Q80V85 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim62Q80V85 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim62Q80V85 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim62Q80V85 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim62Q80V85 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.27□□□□□ -0.13
Trim62Q80V85 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim62Q80V85 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.13
Trim62Q80V85 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trim62Q80V85 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim62Q80V85 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 Gm11524-201ENSMUST00000119349 807 ntBASIC14.26□□□□□ -0.13
Trim62Q80V85 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim62Q80V85 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim62Q80V85 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.26□□□□□ -0.13
Trim62Q80V85 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Trim62Q80V85 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim62Q80V85 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim62Q80V85 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.26□□□□□ -0.13
Trim62Q80V85 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim62Q80V85 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim62Q80V85 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trim62Q80V85 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim62Q80V85 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim62Q80V85 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim62Q80V85 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim62Q80V85 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim62Q80V85 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim62Q80V85 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim62Q80V85 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim62Q80V85 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim62Q80V85 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim62Q80V85 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim62Q80V85 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim62Q80V85 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim62Q80V85 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim62Q80V85 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim62Q80V85 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim62Q80V85 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim62Q80V85 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.25□□□□□ -0.13
Trim62Q80V85 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim62Q80V85 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim62Q80V85 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim62Q80V85 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim62Q80V85 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms