Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col10a1Q05306 Gm3222-201ENSMUST00000071282 990 ntBASIC12.75□□□□□ -0.37
Col10a1Q05306 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col10a1Q05306 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col10a1Q05306 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col10a1Q05306 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col10a1Q05306 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col10a1Q05306 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col10a1Q05306 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.75□□□□□ -0.37
Col10a1Q05306 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col10a1Q05306 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.74□□□□□ -0.37
Col10a1Q05306 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.74□□□□□ -0.37
Col10a1Q05306 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Col10a1Q05306 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Syt7-204ENSMUST00000223586 1344 ntBASIC12.74□□□□□ -0.37
Col10a1Q05306 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.74□□□□□ -0.37
Col10a1Q05306 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.74□□□□□ -0.37
Col10a1Q05306 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.74□□□□□ -0.37
Col10a1Q05306 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Col10a1Q05306 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.74□□□□□ -0.37
Col10a1Q05306 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.74□□□□□ -0.37
Col10a1Q05306 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.74□□□□□ -0.37
Col10a1Q05306 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.74□□□□□ -0.37
Col10a1Q05306 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col10a1Q05306 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col10a1Q05306 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Col10a1Q05306 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.73□□□□□ -0.37
Col10a1Q05306 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.73□□□□□ -0.37
Col10a1Q05306 Gm13385-201ENSMUST00000121089 220 ntBASIC12.73□□□□□ -0.37
Col10a1Q05306 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Gm16215-201ENSMUST00000161990 637 ntBASIC12.73□□□□□ -0.37
Col10a1Q05306 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.73□□□□□ -0.37
Col10a1Q05306 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col10a1Q05306 Gm24694-201ENSMUST00000180054 110 ntBASIC12.73□□□□□ -0.37
Col10a1Q05306 Gm2445-201ENSMUST00000182798 989 ntBASIC12.73□□□□□ -0.37
Col10a1Q05306 Gm27663-201ENSMUST00000184839 110 ntBASIC12.73□□□□□ -0.37
Col10a1Q05306 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.73□□□□□ -0.37
Col10a1Q05306 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.73□□□□□ -0.37
Col10a1Q05306 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.73□□□□□ -0.37
Col10a1Q05306 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col10a1Q05306 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Col10a1Q05306 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col10a1Q05306 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col10a1Q05306 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col10a1Q05306 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col10a1Q05306 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.72□□□□□ -0.37
Col10a1Q05306 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col10a1Q05306 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Col10a1Q05306 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col10a1Q05306 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col10a1Q05306 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col10a1Q05306 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.72□□□□□ -0.37
Col10a1Q05306 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col10a1Q05306 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms