Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Atxn1P54254 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.7□□□□□ -0.22
Atxn1P54254 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.7□□□□□ -0.22
Atxn1P54254 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Gm9823-201ENSMUST00000051212 327 ntBASIC13.7□□□□□ -0.22
Atxn1P54254 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Atxn1P54254 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.7□□□□□ -0.22
Atxn1P54254 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atxn1P54254 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Atxn1P54254 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.69□□□□□ -0.22
Atxn1P54254 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Atxn1P54254 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Atxn1P54254 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.69□□□□□ -0.22
Atxn1P54254 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Atxn1P54254 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.69□□□□□ -0.22
Atxn1P54254 Gm37230-201ENSMUST00000194491 818 ntBASIC13.69□□□□□ -0.22
Atxn1P54254 Gm9182-201ENSMUST00000217829 639 ntBASIC13.69□□□□□ -0.22
Atxn1P54254 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.69□□□□□ -0.22
Atxn1P54254 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.69□□□□□ -0.22
Atxn1P54254 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Atxn1P54254 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.69□□□□□ -0.22
Atxn1P54254 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atxn1P54254 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Atxn1P54254 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.68□□□□□ -0.22
Atxn1P54254 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Atxn1P54254 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.68□□□□□ -0.22
Atxn1P54254 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.68□□□□□ -0.22
Atxn1P54254 Gm38266-201ENSMUST00000194931 421 ntBASIC13.68□□□□□ -0.22
Atxn1P54254 Gm7783-201ENSMUST00000204795 781 ntBASIC13.68□□□□□ -0.22
Atxn1P54254 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.68□□□□□ -0.22
Atxn1P54254 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Atxn1P54254 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Atxn1P54254 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Atxn1P54254 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Atxn1P54254 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Atxn1P54254 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atxn1P54254 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Atxn1P54254 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Atxn1P54254 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atxn1P54254 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Atxn1P54254 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Atxn1P54254 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms