Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Hoxb3P09026 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Hoxb3P09026 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.72□□□□□ -0.21
Hoxb3P09026 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Hoxb3P09026 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.72□□□□□ -0.21
Hoxb3P09026 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.72□□□□□ -0.21
Hoxb3P09026 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.72□□□□□ -0.21
Hoxb3P09026 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.72□□□□□ -0.21
Hoxb3P09026 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.72□□□□□ -0.21
Hoxb3P09026 Gm7467-201ENSMUST00000185173 652 ntBASIC13.72□□□□□ -0.21
Hoxb3P09026 Gm3508-201ENSMUST00000186012 792 ntBASIC13.72□□□□□ -0.21
Hoxb3P09026 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.72□□□□□ -0.21
Hoxb3P09026 Gm6082-201ENSMUST00000215204 454 ntBASIC13.72□□□□□ -0.21
Hoxb3P09026 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.72□□□□□ -0.21
Hoxb3P09026 CT010431.1-201ENSMUST00000221249 1080 ntBASIC13.72□□□□□ -0.21
Hoxb3P09026 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Hoxb3P09026 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.72□□□□□ -0.21
Hoxb3P09026 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hoxb3P09026 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hoxb3P09026 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.72□□□□□ -0.21
Hoxb3P09026 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Hoxb3P09026 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxb3P09026 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Hoxb3P09026 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.71□□□□□ -0.21
Hoxb3P09026 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Hoxb3P09026 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxb3P09026 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Hoxb3P09026 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxb3P09026 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxb3P09026 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxb3P09026 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Hoxb3P09026 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxb3P09026 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Hoxb3P09026 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxb3P09026 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Hoxb3P09026 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxb3P09026 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxb3P09026 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxb3P09026 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxb3P09026 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.71□□□□□ -0.21
Hoxb3P09026 Gm16397-201ENSMUST00000122201 494 ntBASIC13.71□□□□□ -0.21
Hoxb3P09026 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.71□□□□□ -0.21
Hoxb3P09026 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.71□□□□□ -0.21
Hoxb3P09026 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.71□□□□□ -0.21
Hoxb3P09026 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.71□□□□□ -0.21
Hoxb3P09026 Gm8927-201ENSMUST00000181978 981 ntBASIC13.71□□□□□ -0.21
Hoxb3P09026 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.71□□□□□ -0.21
Hoxb3P09026 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.71□□□□□ -0.21
Hoxb3P09026 Gm18905-201ENSMUST00000205454 928 ntBASIC13.71□□□□□ -0.21
Hoxb3P09026 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxb3P09026 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Hoxb3P09026 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxb3P09026 Gm3222-201ENSMUST00000071282 990 ntBASIC13.71□□□□□ -0.21
Hoxb3P09026 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Hoxb3P09026 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Hoxb3P09026 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxb3P09026 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxb3P09026 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.71□□□□□ -0.21
Hoxb3P09026 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxb3P09026 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Hoxb3P09026 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.71□□□□□ -0.22
Hoxb3P09026 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxb3P09026 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxb3P09026 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxb3P09026 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hoxb3P09026 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxb3P09026 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxb3P09026 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxb3P09026 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxb3P09026 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxb3P09026 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxb3P09026 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxb3P09026 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxb3P09026 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxb3P09026 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxb3P09026 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxb3P09026 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxb3P09026 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms