Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
P01852 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
P01852 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
P01852 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
P01852 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
P01852 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
P01852 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.64□□□□□ -0.39
P01852 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.64□□□□□ -0.39
P01852 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.64□□□□□ -0.39
P01852 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
P01852 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.64□□□□□ -0.39
P01852 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
P01852 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.64□□□□□ -0.39
P01852 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
P01852 Gm16215-201ENSMUST00000161990 637 ntBASIC12.64□□□□□ -0.39
P01852 Gm9522-201ENSMUST00000182394 926 ntBASIC12.64□□□□□ -0.39
P01852 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
P01852 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.64□□□□□ -0.39
P01852 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.64□□□□□ -0.39
P01852 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
P01852 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
P01852 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
P01852 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
P01852 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.63□□□□□ -0.39
P01852 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.63□□□□□ -0.39
P01852 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.63□□□□□ -0.39
P01852 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.63□□□□□ -0.39
P01852 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
P01852 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.63□□□□□ -0.39
P01852 Gm5866-201ENSMUST00000177881 973 ntBASIC12.63□□□□□ -0.39
P01852 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.63□□□□□ -0.39
P01852 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.63□□□□□ -0.39
P01852 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.63□□□□□ -0.39
P01852 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.63□□□□□ -0.39
P01852 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.63□□□□□ -0.39
P01852 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
P01852 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
P01852 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.63□□□□□ -0.39
P01852 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Acot6-202ENSMUST00000222921 3622 ntBASIC12.63□□□□□ -0.39
P01852 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
P01852 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
P01852 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.63□□□□□ -0.39
P01852 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P01852 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
P01852 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
P01852 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
P01852 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
P01852 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P01852 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P01852 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P01852 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.62□□□□□ -0.39
P01852 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
P01852 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P01852 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.62□□□□□ -0.39
P01852 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
P01852 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
P01852 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms