Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.48□□□□□ -0.41
Smim17A0A504 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.48□□□□□ -0.41
Smim17A0A504 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.48□□□□□ -0.41
Smim17A0A504 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.48□□□□□ -0.41
Smim17A0A504 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smim17A0A504 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smim17A0A504 Gm27867-201ENSMUST00000184778 125 ntBASIC12.48□□□□□ -0.41
Smim17A0A504 Gm6296-201ENSMUST00000222599 943 ntBASIC12.48□□□□□ -0.41
Smim17A0A504 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Smim17A0A504 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Smim17A0A504 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.48□□□□□ -0.41
Smim17A0A504 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smim17A0A504 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.48□□□□□ -0.41
Smim17A0A504 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim17A0A504 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smim17A0A504 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.47□□□□□ -0.41
Smim17A0A504 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smim17A0A504 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smim17A0A504 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Olfr129-201ENSMUST00000122318 993 ntBASIC12.47□□□□□ -0.41
Smim17A0A504 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smim17A0A504 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smim17A0A504 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.47□□□□□ -0.41
Smim17A0A504 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smim17A0A504 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.47□□□□□ -0.41
Smim17A0A504 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.47□□□□□ -0.41
Smim17A0A504 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.47□□□□□ -0.41
Smim17A0A504 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Smim17A0A504 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smim17A0A504 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Smim17A0A504 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim17A0A504 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Smim17A0A504 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim17A0A504 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smim17A0A504 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim17A0A504 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim17A0A504 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim17A0A504 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim17A0A504 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms