Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm27430-201ENSMUST00000184585 107 ntBASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm28630-201ENSMUST00000187806 498 ntBASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm44333-201ENSMUST00000197168 107 ntBASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm18027-201ENSMUST00000218947 619 ntBASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm27622-201ENSMUST00000183779 60 ntBASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Matn2-206ENSMUST00000228570 2798 ntBASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms