Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm18049-201ENSMUST00000208909 581 ntBASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav5-4A0A075B652 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav5-4A0A075B652 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Gm13823-201ENSMUST00000119930 345 ntBASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Gm43125-201ENSMUST00000201724 730 ntBASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5-4A0A075B652 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Gm9824-201ENSMUST00000178707 561 ntBASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Mir6990-201ENSMUST00000183724 91 ntBASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5-4A0A075B652 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms