Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
CcsQ9WU84 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
CcsQ9WU84 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
CcsQ9WU84 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
CcsQ9WU84 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.76□□□□□ -0.69
CcsQ9WU84 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.76□□□□□ -0.69
CcsQ9WU84 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
CcsQ9WU84 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
CcsQ9WU84 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 AC090659.1-201ENSMUST00000224334 768 ntBASIC10.76□□□□□ -0.69
CcsQ9WU84 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
CcsQ9WU84 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.76□□□□□ -0.69
CcsQ9WU84 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.76□□□□□ -0.69
CcsQ9WU84 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CcsQ9WU84 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
CcsQ9WU84 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.75□□□□□ -0.69
CcsQ9WU84 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
CcsQ9WU84 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.75□□□□□ -0.69
CcsQ9WU84 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
CcsQ9WU84 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC10.75□□□□□ -0.69
CcsQ9WU84 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.75□□□□□ -0.69
CcsQ9WU84 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC10.75□□□□□ -0.69
CcsQ9WU84 Mir3113-201ENSMUST00000175478 76 ntBASIC10.75□□□□□ -0.69
CcsQ9WU84 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC10.75□□□□□ -0.69
CcsQ9WU84 Gm2756-201ENSMUST00000195851 400 ntBASIC10.75□□□□□ -0.69
CcsQ9WU84 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC10.75□□□□□ -0.69
CcsQ9WU84 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.75□□□□□ -0.69
CcsQ9WU84 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
CcsQ9WU84 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.75□□□□□ -0.69
CcsQ9WU84 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CcsQ9WU84 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
CcsQ9WU84 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC10.75□□□□□ -0.69
CcsQ9WU84 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.75□□□□□ -0.69
CcsQ9WU84 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CcsQ9WU84 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
CcsQ9WU84 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.75□□□□□ -0.69
CcsQ9WU84 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
CcsQ9WU84 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms