Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Vsx1Q91V10 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.65□□□□□ -0.22
Vsx1Q91V10 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx1Q91V10 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Vsx1Q91V10 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Vsx1Q91V10 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
Vsx1Q91V10 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Gm12882-201ENSMUST00000121696 517 ntBASIC13.64□□□□□ -0.23
Vsx1Q91V10 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.64□□□□□ -0.23
Vsx1Q91V10 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Gm19184-201ENSMUST00000196798 928 ntBASIC13.64□□□□□ -0.23
Vsx1Q91V10 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Vsx1Q91V10 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Gm26464-201ENSMUST00000157094 305 ntBASIC13.63□□□□□ -0.23
Vsx1Q91V10 Gm22331-201ENSMUST00000158066 136 ntBASIC13.63□□□□□ -0.23
Vsx1Q91V10 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Gm3961-201ENSMUST00000204425 994 ntBASIC13.63□□□□□ -0.23
Vsx1Q91V10 Gm19309-201ENSMUST00000218295 205 ntBASIC13.63□□□□□ -0.23
Vsx1Q91V10 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.63□□□□□ -0.23
Vsx1Q91V10 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms