Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf8Q8VC56 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf8Q8VC56 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms