Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.27□□□□□ -0.6
Nup35Q8R4R6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nup35Q8R4R6 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nup35Q8R4R6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nup35Q8R4R6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Gm11543-201ENSMUST00000120758 370 ntBASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Mir5131-201ENSMUST00000175426 93 ntBASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.27□□□□□ -0.61
Nup35Q8R4R6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup35Q8R4R6 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.26□□□□□ -0.61
Nup35Q8R4R6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Gm6973-201ENSMUST00000117080 721 ntBASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Gm17968-201ENSMUST00000194902 784 ntBASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup35Q8R4R6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms