Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf7Q8R0S1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Gm24420-201ENSMUST00000176676 59 ntBASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Atf7Q8R0S1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Gm44872-201ENSMUST00000207864 420 ntBASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf7Q8R0S1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms