Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CroccQ8CJ40 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CroccQ8CJ40 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CroccQ8CJ40 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CroccQ8CJ40 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CroccQ8CJ40 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.23□□□□□ -0.29
CroccQ8CJ40 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.23□□□□□ -0.29
CroccQ8CJ40 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CroccQ8CJ40 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CroccQ8CJ40 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CroccQ8CJ40 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CroccQ8CJ40 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.23□□□□□ -0.29
CroccQ8CJ40 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CroccQ8CJ40 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CroccQ8CJ40 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CroccQ8CJ40 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CroccQ8CJ40 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CroccQ8CJ40 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CroccQ8CJ40 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.22□□□□□ -0.29
CroccQ8CJ40 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.22□□□□□ -0.29
CroccQ8CJ40 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Gm11524-201ENSMUST00000119349 807 ntBASIC13.22□□□□□ -0.29
CroccQ8CJ40 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Gm5279-201ENSMUST00000199575 745 ntBASIC13.22□□□□□ -0.29
CroccQ8CJ40 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.22□□□□□ -0.29
CroccQ8CJ40 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CroccQ8CJ40 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.22□□□□□ -0.29
CroccQ8CJ40 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Gm13385-201ENSMUST00000121089 220 ntBASIC13.21□□□□□ -0.29
CroccQ8CJ40 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Gm24694-201ENSMUST00000180054 110 ntBASIC13.21□□□□□ -0.29
CroccQ8CJ40 Gm27663-201ENSMUST00000184839 110 ntBASIC13.21□□□□□ -0.29
CroccQ8CJ40 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
CroccQ8CJ40 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CroccQ8CJ40 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CroccQ8CJ40 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CroccQ8CJ40 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CroccQ8CJ40 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CroccQ8CJ40 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CroccQ8CJ40 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CroccQ8CJ40 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CroccQ8CJ40 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CroccQ8CJ40 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.21□□□□□ -0.3
CroccQ8CJ40 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms