Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam43aQ8BUP8 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Gm11745-201ENSMUST00000121669 448 ntBASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Gm11025-201ENSMUST00000140773 466 ntBASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Gm38114-201ENSMUST00000191877 1232 ntBASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Fam43aQ8BUP8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Gm2213-201ENSMUST00000197485 688 ntBASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Fam43aQ8BUP8 AC154404.1-201ENSMUST00000223601 2077 ntBASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Gm24513-201ENSMUST00000174964 138 ntBASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Gm27702-201ENSMUST00000184512 56 ntBASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Gm27397-201ENSMUST00000184997 107 ntBASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.48■□□□□ 0.07
Fam43aQ8BUP8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms