Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4Q8BQZ5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Mir1897-201ENSMUST00000122581 272 ntBASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Dupd1-202ENSMUST00000224735 548 ntBASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cpsf4Q8BQZ5 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms