Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gli3Q61602 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gli3Q61602 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gli3Q61602 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Gli3Q61602 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gli3Q61602 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Gli3Q61602 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gli3Q61602 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gli3Q61602 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gli3Q61602 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC18.17■□□□□ 0.5
Gli3Q61602 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Gli3Q61602 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Gli3Q61602 Gzmn-202ENSMUST00000225535 989 ntBASIC18.17■□□□□ 0.5
Gli3Q61602 AC113031.8-201ENSMUST00000227856 631 ntBASIC18.17■□□□□ 0.5
Gli3Q61602 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Gli3Q61602 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC18.17■□□□□ 0.5
Gli3Q61602 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC18.17■□□□□ 0.5
Gli3Q61602 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
Gli3Q61602 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.17■□□□□ 0.5
Gli3Q61602 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC18.17■□□□□ 0.5
Gli3Q61602 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.17■□□□□ 0.5
Gli3Q61602 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC18.17■□□□□ 0.5
Gli3Q61602 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC18.17■□□□□ 0.5
Gli3Q61602 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gli3Q61602 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gli3Q61602 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gli3Q61602 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gli3Q61602 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gli3Q61602 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gli3Q61602 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gli3Q61602 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Gli3Q61602 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gli3Q61602 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC18.16■□□□□ 0.5
Gli3Q61602 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC18.16■□□□□ 0.5
Gli3Q61602 Gm17812-201ENSMUST00000204935 318 ntBASIC18.16■□□□□ 0.5
Gli3Q61602 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gli3Q61602 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gli3Q61602 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gli3Q61602 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gli3Q61602 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.16■□□□□ 0.5
Gli3Q61602 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gli3Q61602 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gli3Q61602 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gli3Q61602 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC18.15■□□□□ 0.5
Gli3Q61602 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gli3Q61602 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC18.15■□□□□ 0.5
Gli3Q61602 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gli3Q61602 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gli3Q61602 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gli3Q61602 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Gli3Q61602 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC18.15■□□□□ 0.5
Gli3Q61602 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
Gli3Q61602 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC18.15■□□□□ 0.5
Gli3Q61602 AC169036.1-201ENSMUST00000227994 296 ntBASIC18.15■□□□□ 0.5
Gli3Q61602 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Gli3Q61602 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gli3Q61602 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gli3Q61602 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gli3Q61602 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gli3Q61602 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gli3Q61602 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Gli3Q61602 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gli3Q61602 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gli3Q61602 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gli3Q61602 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Gli3Q61602 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gli3Q61602 Gm6506-201ENSMUST00000119775 1136 ntBASIC18.14■□□□□ 0.49
Gli3Q61602 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC18.14■□□□□ 0.49
Gli3Q61602 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC18.14■□□□□ 0.49
Gli3Q61602 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC18.14■□□□□ 0.49
Gli3Q61602 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gli3Q61602 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gli3Q61602 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gli3Q61602 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC18.14■□□□□ 0.49
Gli3Q61602 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Gli3Q61602 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gli3Q61602 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Gm11450-201ENSMUST00000121144 333 ntBASIC18.13■□□□□ 0.49
Gli3Q61602 Gm25545-201ENSMUST00000122673 323 ntBASIC18.13■□□□□ 0.49
Gli3Q61602 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms