Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Gm29741-201ENSMUST00000192667 421 ntBASIC10.72□□□□□ -0.69
Smim6Q3U0I6 AC153881.2-201ENSMUST00000214877 204 ntBASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 AC121577.1-201ENSMUST00000227302 707 ntBASIC10.72□□□□□ -0.69
Smim6Q3U0I6 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smim6Q3U0I6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Gm7935-201ENSMUST00000100555 1278 ntBASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.71□□□□□ -0.69
Smim6Q3U0I6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim6Q3U0I6 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smim6Q3U0I6 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.71□□□□□ -0.7
Smim6Q3U0I6 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
Smim6Q3U0I6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smim6Q3U0I6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smim6Q3U0I6 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.7
Smim6Q3U0I6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smim6Q3U0I6 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Gm12895-201ENSMUST00000122214 226 ntBASIC10.7□□□□□ -0.7
Smim6Q3U0I6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Gm43935-201ENSMUST00000203569 1050 ntBASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms