Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.27■□□□□ 0.35
Nkx2-3P97334 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Nkx2-3P97334 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx2-3P97334 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.27■□□□□ 0.35
Nkx2-3P97334 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.27■□□□□ 0.35
Nkx2-3P97334 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Nkx2-3P97334 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx2-3P97334 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Nkx2-3P97334 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Gm5620-201ENSMUST00000077991 1348 ntBASIC17.26■□□□□ 0.35
Nkx2-3P97334 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC17.26■□□□□ 0.35
Nkx2-3P97334 Gm6013-201ENSMUST00000212264 699 ntBASIC17.26■□□□□ 0.35
Nkx2-3P97334 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC17.26■□□□□ 0.35
Nkx2-3P97334 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC17.26■□□□□ 0.35
Nkx2-3P97334 AC133598.1-201ENSMUST00000224327 660 ntBASIC17.26■□□□□ 0.35
Nkx2-3P97334 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Gm10268-201ENSMUST00000085340 555 ntBASIC17.26■□□□□ 0.35
Nkx2-3P97334 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Gm45684-201ENSMUST00000210244 1571 ntBASIC17.26■□□□□ 0.35
Nkx2-3P97334 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.26■□□□□ 0.35
Nkx2-3P97334 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-3P97334 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.25■□□□□ 0.35
Nkx2-3P97334 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Mir686-201ENSMUST00000102174 109 ntBASIC17.25■□□□□ 0.35
Nkx2-3P97334 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.25■□□□□ 0.35
Nkx2-3P97334 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Gm26927-201ENSMUST00000182385 965 ntBASIC17.25■□□□□ 0.35
Nkx2-3P97334 Gm38241-201ENSMUST00000192641 898 ntBASIC17.25■□□□□ 0.35
Nkx2-3P97334 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.25■□□□□ 0.35
Nkx2-3P97334 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.25■□□□□ 0.35
Nkx2-3P97334 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Nkx2-3P97334 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-3P97334 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-3P97334 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-3P97334 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Nkx2-3P97334 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-3P97334 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-3P97334 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-3P97334 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-3P97334 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Nkx2-3P97334 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-3P97334 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-3P97334 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.24■□□□□ 0.35
Nkx2-3P97334 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-3P97334 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-3P97334 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-3P97334 Gm37922-201ENSMUST00000195596 455 ntBASIC17.24■□□□□ 0.35
Nkx2-3P97334 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.24■□□□□ 0.35
Nkx2-3P97334 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.24■□□□□ 0.35
Nkx2-3P97334 Gm2824-203ENSMUST00000226189 1228 ntBASIC17.24■□□□□ 0.35
Nkx2-3P97334 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-3P97334 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-3P97334 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Nkx2-3P97334 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-3P97334 Gm15544-201ENSMUST00000118776 1531 ntBASIC17.24■□□□□ 0.35
Nkx2-3P97334 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms