Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ybx1P62960 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ybx1P62960 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ybx1P62960 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ybx1P62960 Gm13612-201ENSMUST00000119276 390 ntBASIC14.14□□□□□ -0.15
Ybx1P62960 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.14□□□□□ -0.15
Ybx1P62960 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.14□□□□□ -0.15
Ybx1P62960 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ybx1P62960 Gm24196-201ENSMUST00000179161 110 ntBASIC14.14□□□□□ -0.15
Ybx1P62960 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.14□□□□□ -0.15
Ybx1P62960 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ybx1P62960 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ybx1P62960 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ybx1P62960 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ybx1P62960 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ybx1P62960 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ybx1P62960 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ybx1P62960 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.14□□□□□ -0.15
Ybx1P62960 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ybx1P62960 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ybx1P62960 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ybx1P62960 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.14□□□□□ -0.15
Ybx1P62960 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ybx1P62960 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.14□□□□□ -0.15
Ybx1P62960 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ybx1P62960 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ybx1P62960 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ybx1P62960 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ybx1P62960 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ybx1P62960 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ybx1P62960 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ybx1P62960 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ybx1P62960 Gm23931-201ENSMUST00000103842 109 ntBASIC14.13□□□□□ -0.15
Ybx1P62960 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ybx1P62960 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ybx1P62960 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.13□□□□□ -0.15
Ybx1P62960 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ybx1P62960 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.13□□□□□ -0.15
Ybx1P62960 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Ybx1P62960 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.13□□□□□ -0.15
Ybx1P62960 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.13□□□□□ -0.15
Ybx1P62960 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ybx1P62960 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ybx1P62960 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.13□□□□□ -0.15
Ybx1P62960 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.13□□□□□ -0.15
Ybx1P62960 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ybx1P62960 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.13□□□□□ -0.15
Ybx1P62960 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ybx1P62960 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ybx1P62960 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ybx1P62960 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ybx1P62960 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.13□□□□□ -0.15
Ybx1P62960 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.12□□□□□ -0.15
Ybx1P62960 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ybx1P62960 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
Ybx1P62960 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ybx1P62960 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Ybx1P62960 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.12□□□□□ -0.15
Ybx1P62960 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Gm44397-201ENSMUST00000195950 113 ntBASIC14.12□□□□□ -0.15
Ybx1P62960 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.12□□□□□ -0.15
Ybx1P62960 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.12□□□□□ -0.15
Ybx1P62960 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.12□□□□□ -0.15
Ybx1P62960 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.12□□□□□ -0.15
Ybx1P62960 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.12□□□□□ -0.15
Ybx1P62960 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.12□□□□□ -0.15
Ybx1P62960 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.12□□□□□ -0.15
Ybx1P62960 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ybx1P62960 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ybx1P62960 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ybx1P62960 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.11□□□□□ -0.15
Ybx1P62960 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms