Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Sssca1P56873 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sssca1P56873 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.17□□□□□ -0.62
Sssca1P56873 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.17□□□□□ -0.62
Sssca1P56873 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.17□□□□□ -0.62
Sssca1P56873 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.17□□□□□ -0.62
Sssca1P56873 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Gm18737-201ENSMUST00000173594 937 ntBASIC11.17□□□□□ -0.62
Sssca1P56873 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.17□□□□□ -0.62
Sssca1P56873 Gm2445-201ENSMUST00000182798 989 ntBASIC11.17□□□□□ -0.62
Sssca1P56873 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.17□□□□□ -0.62
Sssca1P56873 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.17□□□□□ -0.62
Sssca1P56873 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.17□□□□□ -0.62
Sssca1P56873 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.17□□□□□ -0.62
Sssca1P56873 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.17□□□□□ -0.62
Sssca1P56873 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.17□□□□□ -0.62
Sssca1P56873 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sssca1P56873 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sssca1P56873 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.16□□□□□ -0.62
Sssca1P56873 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sssca1P56873 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sssca1P56873 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.16□□□□□ -0.62
Sssca1P56873 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
Sssca1P56873 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.16□□□□□ -0.62
Sssca1P56873 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sssca1P56873 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sssca1P56873 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sssca1P56873 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.16□□□□□ -0.62
Sssca1P56873 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Gm15427-201ENSMUST00000117288 531 ntBASIC11.16□□□□□ -0.62
Sssca1P56873 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.16□□□□□ -0.62
Sssca1P56873 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.16□□□□□ -0.62
Sssca1P56873 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.16□□□□□ -0.62
Sssca1P56873 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.16□□□□□ -0.62
Sssca1P56873 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sssca1P56873 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.16□□□□□ -0.62
Sssca1P56873 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.16□□□□□ -0.62
Sssca1P56873 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sssca1P56873 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Sssca1P56873 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.16□□□□□ -0.62
Sssca1P56873 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sssca1P56873 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.16□□□□□ -0.62
Sssca1P56873 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sssca1P56873 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Sssca1P56873 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.15□□□□□ -0.62
Sssca1P56873 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Sssca1P56873 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms